在线平台:ColabFold / Hugging Face / Colab
浏览器内 5 分钟出结果的工具,零安装、零编程门槛。
ColabFold (AlphaFold2 in Colab)
Section titled “ColabFold (AlphaFold2 in Colab)”- https://github.com/sokrypton/ColabFold
- 一键 Colab:https://colab.research.google.com/github/sokrypton/ColabFold/blob/main/AlphaFold2.ipynb
- 5-15 分钟一个蛋白预测
AlphaFold Protein Structure Database
Section titled “AlphaFold Protein Structure Database”- https://alphafold.ebi.ac.uk/
- 2 亿+ 预测结构,直接搜索 UniProt ID
Hugging Face
Section titled “Hugging Face”- https://huggingface.co/
- 模型库(含 ESM-2、DNABERT、Bloom 等)
- Spaces(在线 demo)
- Datasets(数据集)
- 中文教程:https://hf.co/learn
Google Colab
Section titled “Google Colab”- https://colab.research.google.com/
- 免费 T4 GPU
- Colab Pro 升级到 V100/A100
Kaggle Notebooks
Section titled “Kaggle Notebooks”- https://www.kaggle.com/code
- 免费 GPU + 数据集
Replicate / Modal / Lambda Labs
Section titled “Replicate / Modal / Lambda Labs”- 商业 GPU 平台
- 5 分钟用 ColabFold 跑你的蛋白
- 5 分钟在 HF 上用 ESM-2 提嵌入
- 5 分钟在 HF Space 试 Stable Diffusion
- 链接.md